BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011A07SP1|AL426137
(769 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1684 1476 0.0
>3x_Contig1684
Length = 14609
Score = 1476 bits (740), Expect = 0.0
Identities = 758/769 (98%)
Strand = Plus / Plus
Query: 1 gatctcattatattttgcaaacctaccgctgaacaagtagaggcttttcacaagatttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11591 gatctcattatattttgcaaacctaccgctgaacaagtagaggcttttcacaagatttta 11650
Query: 61 accgaaggcangctaaatttcagcaacatgacattcaactcttcattggggttgattact 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11651 accgaagggcagctaaatttcagcaacatgacattcaactcttcattggggttgattact 11710
Query: 121 ctattcaaaaaaatctgcaattccacccgcttgatcaaaacagatccatactatgaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11711 ctattcaaaaaaatctgcaattccacccgcttgatcaaaacagatccatactatgaagaa 11770
Query: 181 aggcttagtcaagttcagacttctagtacctctggaaaattcacctcggggaaacttaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11771 aggcttagtcaagttcagacttctagtacctctggaaaattcacctcggggaaacttaga 11830
Query: 241 atacttctttcattattacatgagttgaaaaccaagactgacgagaaagtagtagtgatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11831 atacttctttcattattacatgagttgaaaaccaagactgacgagaaagtagtagtgatt 11890
Query: 301 tcaaattacacgcmaaccctagacatcattgagggacattgtagttcagaagggtacact 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11891 tcaaattacacgcaaaccctagacatcattgagggacattgtagttcagaagggtacact 11950
Query: 361 tctgcmcgattagatggaagttcagcmaccaaaacccgtgatcagattgtgacatccttc 420
||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 11951 tctgcacgattagatggaagtacagcaaccaaaacccgtgatcagattgtgacatccttc 12010
Query: 421 aataatgatccatctatttttgttttccttttaagtgcgaagtcaggcggtgtgggacta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12011 aataatgatccatctatttttgttttccttttaagtgcgaagtcaggcggtgtgggacta 12070
Query: 481 aacttaatcggtgcatcaagacttgtattattcgataatgattggvacccatccmttgat 540
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 12071 aacttaatcggtgcatcaagacttgtattattcgataatgattggaacccatccattgat 12130
Query: 541 ttacaggccatgtcaagaattcatcgcgatggtcagagaaggccatgtttcatttataga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12131 ttacaggccatgtcaagaattcatcgcgatggtcagagaaggccatgtttcatttataga 12190
Query: 601 cttgtgacaaccggatgtattgatgagaagatacttcaaagacagttaatgaraatagcg 660
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12191 cttgtgacaaccggatgtattgatgagaagatacttcaaagacagttaatgaaaatagcg 12250
Query: 661 ctttctaaaaagttcttggacagtgccacagatcaatcaaaaaatgatgatgatcttttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12251 ctttctaaaaagttcttggacagtgccacagatcaatcaaaaaatgatgatgatcttttt 12310
Query: 721 cagcaggragagttgaaggacttgtttaccattaatttgtccactttat 769
||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 12311 cagcaggaagagttgaaggacttgtttaccattaatttgtccactttat 12359
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6048
Number of Sequences: 1807
Number of extensions: 6048
Number of successful extensions: 126
Number of sequences better than 1.0e-20: 1
length of query: 769
length of database: 10,358,551
effective HSP length: 16
effective length of query: 753
effective length of database: 10,329,639
effective search space: 7778218167
effective search space used: 7778218167
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)